Seidr
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Getting Started
Building Seidr
Getting Started
Basics
The Crowd Network Idea
Importing text based formats into
Seidr
Aggregating networks into a crowd network
Estimating a hard threshold for a given seidr network
Calculating a Network Backbone
Getting network statistics
Algorithms
ANOVERENCE
ARACNE
CLR
Correlation
Ensemble methods
GENIE3
NARROMI
Partial Correlation
PLSNET
TIGRESS
TOM Similarity
Workflows
Comparing networks of different species with
seidr
Running seidr with nextflow
Implementation Details
Using multiple processors to infer networks
SeidrFiles
References
References
Seidr
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