Installing Seidr¶
Conda¶
The easiest way to install seidr is via conda
. The conda
package comes in three flavours. One without MPI support, and one package each with support for OpenMPI and MPICH respectively:
# No MPI support (run on one node/computer)
conda create -n seidr -c bioconda -c conda-forge 'seidr=*=nompi*'
# OpenMPI (multi-node)
conda create -n seidr -c bioconda -c conda-forge 'seidr=*=mpi_openmpi*'
# MPICH
conda create -n seidr -c bioconda -c conda-forge 'seidr=*=mpi_mpich*'
Building from source¶
See Building Seidr.